RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02530.1 View Network Show in Genome Browser |
| Other Names | Os05g0116100 |
| Description | glutathione S-transferase, N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 876950-880628 Nucleotide Length: 894 |
| Protein-coding | LOC_Os05g02530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g36810 LOC_Os01g49710 LOC_Os04g35560 LOC_Os03g04260 LOC_Os01g72130 LOC_Os01g27260 LOC_Os01g70960 LOC_Os02g12800 LOC_Os02g40000 LOC_Os01g73310 LOC_Os04g32660 More.. |
| Downstream Genes | LOC_Os10g38360 LOC_Os10g38580 LOC_Os10g38340 LOC_Os10g38710 LOC_Os05g23620 LOC_Os09g29200 LOC_Os09g20220 LOC_Os10g38160 LOC_Os10g38470 LOC_Os10g38700 LOC_Os12g10604 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02530.1 |
| Rice Genome Annotation | LOC_Os05g02530.1 |
| Ricechip | LOC_Os05g02530.1 |
| KEGG | osa:4337622 dosa:Os05t0116100-01 |
| Entrez-Gene | 4337622 |