RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02890.1 View Network Show in Genome Browser |
| Other Names | Os05g0120200 |
| Description | white-brown complex homolog protein 16, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1050046-1052431 Nucleotide Length: 2100 |
| Protein-coding | LOC_Os05g02890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g62250 LOC_Os02g58020 LOC_Os03g19350 |
| Downstream Genes | LOC_Os09g36300 LOC_Os07g48960 LOC_Os05g44310 LOC_Os08g41520 LOC_Os06g13050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02890.1 |
| Rice Genome Annotation | LOC_Os05g02890.1 |
| Ricechip | LOC_Os05g02890.1 |
| KEGG | osa:4337645 dosa:Os05t0120200-01 |
| Entrez-Gene | 4337645 |