RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03030.1 View Network Show in Genome Browser |
| Other Names | Os05g0121500 |
| Description | 50S ribosomal protein L10, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1146189-1147106 Nucleotide Length: 576 |
| Protein-coding | LOC_Os05g03030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47330 LOC_Os03g52400 LOC_Os03g03020 LOC_Os02g47140 LOC_Os03g61030 LOC_Os01g64090 LOC_Os02g21660 LOC_Os02g24614 LOC_Os04g50990 LOC_Os02g10540 LOC_Os04g16820 More.. |
| Downstream Genes | LOC_Os05g49320 LOC_Os05g48050 LOC_Os06g35470 LOC_Os05g32220 LOC_Os08g44450 LOC_Os08g44380 LOC_Os10g32870 LOC_Os07g43310 LOC_Os05g22830 LOC_Os05g22860 LOC_Os10g35290 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03030.1 |
| Rice Genome Annotation | LOC_Os05g03030.1 |
| Ricechip | LOC_Os05g03030.1 |
| KEGG | osa:4337653 dosa:Os05t0121500-01 |
| Entrez-Gene | 4337653 |