RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03050.1 View Network Show in Genome Browser |
| Other Names | Os05g0121700 |
| Description | DNA repair protein Rad51, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1186090-1190655 Nucleotide Length: 1092 |
| Protein-coding | LOC_Os05g03050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g43850 LOC_Os01g67510 LOC_Os01g71690 LOC_Os01g17250 LOC_Os04g57230 LOC_Os01g39630 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os04g44354 More.. |
| Downstream Genes | LOC_Os09g01680 LOC_Os10g10244 LOC_Os07g15440 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os10g18530 LOC_Os09g34230 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03050.1 |
| Rice Genome Annotation | LOC_Os05g03050.1 |
| Ricechip | LOC_Os05g03050.1 |
| KEGG | osa:4337655 dosa:Os05t0121700-01 |
| Entrez-Gene | 4337655 |