RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03150.1 View Network Show in Genome Browser |
| Other Names | Os05g0122900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1259222-1261993 Nucleotide Length: 246 |
| Protein-coding | LOC_Os05g03150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g27290 LOC_Os03g38520 LOC_Os01g13030 LOC_Os05g01994 LOC_Os01g21440 LOC_Os01g01369 |
| Downstream Genes | LOC_Os06g50970 LOC_Os06g08005 LOC_Os06g07969 LOC_Os06g07905 LOC_Os06g07869 LOC_Os09g38740 LOC_Os08g44250 LOC_Os09g39550 LOC_Os08g44460 LOC_Os05g33210 |
| Reference | |
|---|---|
| PubMed | 15061077 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03150.1 |
| Rice Genome Annotation | LOC_Os05g03150.1 |
| Ricechip | LOC_Os05g03150.1 |
| KEGG | osa:4337663 dosa:Os05t0122900-01 |
| Entrez-Gene | 4337663 |