RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03174.1 View Network Show in Genome Browser |
| Other Names | Os05g0123100 |
| Description | glycosyltransferase family 43 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1278891-1285604 Nucleotide Length: 1116 |
| Protein-coding | LOC_Os05g03174 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62020 LOC_Os03g12250 LOC_Os03g63540 LOC_Os02g15230 LOC_Os04g59330 LOC_Os04g33990 LOC_Os02g41780 LOC_Os03g64320 LOC_Os02g21890 LOC_Os01g59150 LOC_Os01g09010 More.. |
| Downstream Genes | LOC_Os05g32110 LOC_Os05g48270 LOC_Os05g06720 LOC_Os09g32080 LOC_Os06g44620 LOC_Os06g49320 LOC_Os06g03640 LOC_Os12g01560 LOC_Os11g01570 LOC_Os08g35710 LOC_Os12g25690 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172d-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03174.1 |
| Rice Genome Annotation | LOC_Os05g03174.1 |
| Ricechip | LOC_Os05g03174.1 |
| KEGG | osa:4337665 dosa:Os05t0123100-01 |
| Entrez-Gene | 4337665 |