RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03190.1 View Network Show in Genome Browser |
| Other Names | Os05g0123200 |
| Description | IQ calmodulin-binding motif domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1291418-1295542 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os05g03190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g01300 LOC_Os04g48160 LOC_Os04g31900 LOC_Os03g48140 LOC_Os01g59150 LOC_Os02g47880 LOC_Os01g44040 LOC_Os03g60350 LOC_Os02g05680 |
| Downstream Genes | LOC_Os07g30774 LOC_Os06g29350 LOC_Os06g03760 LOC_Os06g45110 LOC_Os07g41360 LOC_Os06g08620 LOC_Os07g07000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03190.1 |
| Rice Genome Annotation | LOC_Os05g03190.1 |
| Ricechip | LOC_Os05g03190.1 |
| KEGG | osa:4337666 dosa:Os05t0123200-01 |
| Entrez-Gene | 4337666 |