RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03440.1 View Network Show in Genome Browser |
| Other Names | Os05g0125100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1440715-1442428 Nucleotide Length: 1158 |
| Protein-coding | LOC_Os05g03440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os10g06700 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1441 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | PWY0-166 P1-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03440.1 |
| Rice Genome Annotation | LOC_Os05g03440.1 |
| Ricechip | LOC_Os05g03440.1 |
| KEGG | osa:9268754 dosa:Os05t0125100-01 |
| Entrez-Gene | 9268754 |