RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03480.2 View Network Show in Genome Browser |
| Other Names | Os05g0125500 |
| Description | acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1470034-1473235 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os05g03480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g22520 LOC_Os01g58380 LOC_Os03g59430 |
| Downstream Genes | LOC_Os08g32850 LOC_Os12g41250 LOC_Os06g01390 LOC_Os06g24704 LOC_Os11g04210 LOC_Os12g04020 LOC_Os07g07470 LOC_Os12g08260 LOC_Os05g06750 LOC_Os09g07830 LOC_Os10g21910 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00280 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03480.2 |
| Rice Genome Annotation | LOC_Os05g03480.2 |
| Ricechip | LOC_Os05g03480.2 |
| KEGG | osa:4337676 dosa:Os05t0125500-01 |
| Entrez-Gene | 4337676 |