RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03540.1 View Network Show in Genome Browser |
| Other Names | Os05g0126200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1497856-1499646 Nucleotide Length: 579 |
| Protein-coding | LOC_Os05g03540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57590 LOC_Os03g62370 LOC_Os03g19990 LOC_Os03g22740 LOC_Os03g10190 |
| Downstream Genes | LOC_Os05g08360 LOC_Os07g44410 LOC_Os07g38930 LOC_Os06g46580 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03540.1 |
| Rice Genome Annotation | LOC_Os05g03540.1 |
| Ricechip | LOC_Os05g03540.1 |
| KEGG | osa:4337680 dosa:Os05t0126200-01 |
| Entrez-Gene | 4337680 |