RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03780.1 View Network Show in Genome Browser |
| Other Names | Os05g0128400 |
| Description | cation efflux family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1675488-1679056 Nucleotide Length: 1257 |
| Protein-coding | LOC_Os05g03780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g23180 LOC_Os03g12530 LOC_Os01g62070 LOC_Os01g03914 LOC_Os03g61070 |
| Reference | |
|---|---|
| PubMed | 21892614 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03780.1 |
| Rice Genome Annotation | LOC_Os05g03780.1 |
| Ricechip | LOC_Os05g03780.1 |
| KEGG | osa:4337694 dosa:Os05t0128400-01 |
| Entrez-Gene | 4337694 |