RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g03910.1 View Network Show in Genome Browser |
| Other Names | Os05g0129900 |
| Description | RNA polymerase II-associated protein 3, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1744573-1748850 Nucleotide Length: 1194 |
| Protein-coding | LOC_Os05g03910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16910 LOC_Os01g55700 LOC_Os03g20750 LOC_Os03g02390 LOC_Os01g43030 LOC_Os03g13370 LOC_Os03g58160 LOC_Os03g22140 LOC_Os03g19200 LOC_Os03g15740 LOC_Os01g53700 More.. |
| Downstream Genes | LOC_Os05g43770 LOC_Os08g39080 LOC_Os06g41750 LOC_Os07g29360 LOC_Os10g37530 LOC_Os06g11320 LOC_Os10g32300 LOC_Os09g36740 LOC_Os07g49000 LOC_Os08g44510 LOC_Os05g51550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g03910.1 |
| Rice Genome Annotation | LOC_Os05g03910.1 |
| Ricechip | LOC_Os05g03910.1 |
| KEGG | osa:4337703 dosa:Os05t0129900-01 |
| Entrez-Gene | 4337703 |