RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04170.4 View Network Show in Genome Browser |
| Other Names | Os05g0132100 |
| Description | AMP-binding enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1866931-1873316 Nucleotide Length: 1818 |
| Protein-coding | LOC_Os05g04170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40860 LOC_Os03g16950 LOC_Os04g48380 LOC_Os03g01180 LOC_Os03g16960 LOC_Os04g58090 LOC_Os03g58580 LOC_Os02g08180 LOC_Os03g03450 LOC_Os04g20474 LOC_Os01g28450 More.. |
| Downstream Genes | LOC_Os07g12890 LOC_Os10g27340 LOC_Os09g04339 LOC_Os09g27830 LOC_Os05g23260 LOC_Os08g17680 LOC_Os09g20090 LOC_Os06g39260 LOC_Os09g19734 LOC_Os11g37920 LOC_Os06g16260 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04170.4 |
| Rice Genome Annotation | LOC_Os05g04170.4 |
| Ricechip | LOC_Os05g04170.4 |
| KEGG | osa:4337714 dosa:Os05t0132100-02 |
| Entrez-Gene | 4337714 |