RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04360.1 View Network Show in Genome Browser |
| Other Names | Os05g0134200 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 1994243-1996903 Nucleotide Length: 1170 |
| Protein-coding | LOC_Os05g04360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40860 LOC_Os01g38950 LOC_Os02g56560 LOC_Os01g51200 LOC_Os02g17910 LOC_Os04g43490 LOC_Os03g51020 LOC_Os01g26280 LOC_Os03g49750 LOC_Os04g06244 LOC_Os02g57080 More.. |
| Downstream Genes | LOC_Os10g33650 LOC_Os05g51560 LOC_Os05g06990 LOC_Os08g04420 LOC_Os12g03810 LOC_Os11g03970 LOC_Os06g22810 LOC_Os08g40170 LOC_Os05g25370 LOC_Os07g47950 LOC_Os06g49170 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04360.1 |
| Rice Genome Annotation | LOC_Os05g04360.1 |
| Ricechip | LOC_Os05g04360.1 |
| KEGG | osa:4337723 dosa:Os05t0134200-01 |
| Entrez-Gene | 4337723 |