RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04620.1 View Network Show in Genome Browser |
| Other Names | Os05g0137300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2172205-2174212 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os05g04620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g28180 LOC_Os03g48080 LOC_Os02g48720 LOC_Os03g58050 LOC_Os01g47340 |
| Downstream Genes | LOC_Os12g23180 LOC_Os10g41470 LOC_Os05g41640 LOC_Os11g13850 LOC_Os07g07709 LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04620.1 |
| Rice Genome Annotation | LOC_Os05g04620.1 |
| Ricechip | LOC_Os05g04620.1 |
| KEGG | osa:4337743 dosa:Os05t0137300-01 |
| Entrez-Gene | 4337743 |