RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04700.1 View Network Show in Genome Browser |
| Other Names | Os05g0138300 |
| Description | OsRCI2-6 - Hydrophobic protein LTI6B, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2219901-2220462 Nucleotide Length: 279 |
| Protein-coding | LOC_Os05g04700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g53720 LOC_Os04g51820 LOC_Os02g07830 LOC_Os02g42860 LOC_Os03g45170 LOC_Os03g54100 LOC_Os04g45040 |
| Downstream Genes | LOC_Os05g32630 LOC_Os05g19500 LOC_Os12g03090 LOC_Os11g03400 LOC_Os12g04990 LOC_Os12g24580 LOC_Os12g42850 LOC_Os11g04980 |
| Reference | |
|---|---|
| PubMed | 17219102 15656983 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04700.1 |
| Rice Genome Annotation | LOC_Os05g04700.1 |
| Ricechip | LOC_Os05g04700.1 |
| KEGG | osa:4337750 dosa:Os05t0138300-03 |
| Entrez-Gene | 4337750 |