RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04850.2 View Network Show in Genome Browser |
| Other Names | Os05g0140500 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2331059-2334278 Nucleotide Length: 477 |
| Protein-coding | LOC_Os05g04850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17010 LOC_Os03g13760 LOC_Os02g01250 LOC_Os03g59710 LOC_Os02g12850 LOC_Os03g18720 LOC_Os03g13800 LOC_Os02g39890 LOC_Os03g50090 LOC_Os01g72890 LOC_Os03g54770 More.. |
| Downstream Genes | LOC_Os12g18880 LOC_Os08g01660 LOC_Os07g47630 LOC_Os11g43620 LOC_Os10g34520 LOC_Os07g10256 LOC_Os06g48230 LOC_Os07g07220 LOC_Os10g06130 LOC_Os09g20590 LOC_Os08g05530 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04850.2 |
| Rice Genome Annotation | LOC_Os05g04850.2 |
| Ricechip | LOC_Os05g04850.2 |
| KEGG | osa:4337757 dosa:Os05t0140500-01 |
| Entrez-Gene | 4337757 |