RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04870.1 View Network Show in Genome Browser |
| Other Names | Os05g0140800 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2345388-2346843 Nucleotide Length: 1137 |
| Protein-coding | LOC_Os05g04870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70430 LOC_Os03g10110 |
| Downstream Genes | LOC_Os11g37270 LOC_Os12g41590 LOC_Os10g35370 LOC_Os09g17750 LOC_Os09g26380 LOC_Os07g12080 |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04870.1 |
| Rice Genome Annotation | LOC_Os05g04870.1 |
| Ricechip | LOC_Os05g04870.1 |
| KEGG | osa:4337759 dosa:Os05t0140800-01 |
| Entrez-Gene | 4337759 |