RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04960.1 View Network Show in Genome Browser |
| Other Names | Os05g0141700 |
| Description | phosphoglycerate mutase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2400648-2402032 Nucleotide Length: 975 |
| Protein-coding | LOC_Os05g04960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51590 LOC_Os04g01230 LOC_Os04g14760 LOC_Os03g01180 LOC_Os03g18310 |
| Downstream Genes | LOC_Os11g05260 LOC_Os08g37140 LOC_Os11g31880 LOC_Os09g11510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04960.1 |
| Rice Genome Annotation | LOC_Os05g04960.1 |
| Ricechip | LOC_Os05g04960.1 |
| KEGG | osa:4337765 dosa:Os05t0141700-01 |
| Entrez-Gene | 4337765 |