RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g04990.1 View Network Show in Genome Browser |
| Other Names | Os05g0141800 |
| Description | adenosylmethionine decarboxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2417277-2418356 Nucleotide Length: 1080 |
| Protein-coding | LOC_Os05g04990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55740 LOC_Os02g15550 |
| Downstream Genes | LOC_Os07g22600 LOC_Os09g37120 LOC_Os08g36150 LOC_Os10g38850 LOC_Os06g33710 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn00330 rn01100 |
| Metacyc Pathways | BSUBPOLYAMSYN-PWY ARGSPECAT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g04990.1 |
| Rice Genome Annotation | LOC_Os05g04990.1 |
| Ricechip | LOC_Os05g04990.1 |
| KEGG | dosa:Os05t0141800-00 |