RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05130.1 View Network Show in Genome Browser |
| Other Names | Os05g0143200 |
| Description | GA20663-PA, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2494982-2499442 Nucleotide Length: 822 |
| Protein-coding | LOC_Os05g05130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g17064 LOC_Os02g46320 LOC_Os02g52370 LOC_Os03g05710 LOC_Os03g42770 |
| Downstream Genes | LOC_Os05g08950 LOC_Os09g38777 LOC_Os09g38772 LOC_Os10g40360 LOC_Os12g04160 LOC_Os11g04370 LOC_Os12g43590 LOC_Os07g46640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05130.1 |
| Rice Genome Annotation | LOC_Os05g05130.1 |
| Ricechip | LOC_Os05g05130.1 |
| KEGG | osa:4337774 dosa:Os05t0143200-01 |
| Entrez-Gene | 4337774 |