RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05210.2 View Network Show in Genome Browser |
| Other Names | Os05g0144100 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2536567-2540743 Nucleotide Length: 1404 |
| Protein-coding | LOC_Os05g05210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g11440 LOC_Os04g40940 LOC_Os04g44730 LOC_Os01g60810 LOC_Os02g52700 LOC_Os02g50620 |
| Downstream Genes | LOC_Os05g39950 LOC_Os09g17840 LOC_Os09g17830 LOC_Os07g12890 LOC_Os06g49990 LOC_Os10g35480 LOC_Os05g36320 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05210.2 |
| Rice Genome Annotation | LOC_Os05g05210.2 |
| Ricechip | LOC_Os05g05210.2 |
| KEGG | osa:4337782 dosa:Os05t0144100-01 |
| Entrez-Gene | 4337782 |