RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05240.2 View Network Show in Genome Browser |
| Other Names | Os05g0144400 |
| Description | serine/threonine protein phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2564221-2573158 Nucleotide Length: 2652 |
| Protein-coding | LOC_Os05g05240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g36419 |
| Downstream Genes | LOC_Os11g15570 LOC_Os07g04550 |
| Reference | |
|---|---|
| PubMed | 23236132 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05240.2 |
| Rice Genome Annotation | LOC_Os05g05240.2 |
| Ricechip | LOC_Os05g05240.2 |
| KEGG | osa:4337785 dosa:Os05t0144400-01 |
| Entrez-Gene | 4337785 |