RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05270.1 View Network Show in Genome Browser |
| Other Names | Os05g0144900 |
| Description | sucrose-phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2595449-2599141 Nucleotide Length: 1272 |
| Protein-coding | LOC_Os05g05270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g28330 LOC_Os03g22120 LOC_Os04g24430 LOC_Os04g17650 LOC_Os02g58480 LOC_Os01g69030 LOC_Os02g09170 |
| Downstream Genes | LOC_Os07g42490 LOC_Os06g09450 |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00500 |
| Metacyc Pathways | SUCSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05270.1 |
| Rice Genome Annotation | LOC_Os05g05270.1 |
| Ricechip | LOC_Os05g05270.1 |
| KEGG | osa:4337789 dosa:Os05t0144900-01 |
| Entrez-Gene | 4337789 |