RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05450.1 View Network Show in Genome Browser |
| Other Names | Os05g0147200 |
| Description | MA3 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2713901-2716796 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os05g05450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40340 LOC_Os04g52200 LOC_Os03g05720 LOC_Os03g22570 LOC_Os03g61200 LOC_Os03g22320 LOC_Os01g13730 LOC_Os02g12600 LOC_Os04g42140 LOC_Os04g02000 LOC_Os02g42040 More.. |
| Downstream Genes | LOC_Os07g36940 LOC_Os12g15420 LOC_Os07g10350 LOC_Os05g51490 LOC_Os05g28320 LOC_Os10g25110 LOC_Os11g19250 LOC_Os05g49230 LOC_Os06g40120 LOC_Os12g03822 LOC_Os11g03990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05450.1 |
| Rice Genome Annotation | LOC_Os05g05450.1 |
| Ricechip | LOC_Os05g05450.1 |
| KEGG | osa:4337800 dosa:Os05t0147200-01 |
| Entrez-Gene | 4337800 |