RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05560.1 View Network Show in Genome Browser |
| Other Names | Os05g0148300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2763255-2764970 Nucleotide Length: 315 |
| Protein-coding | LOC_Os05g05560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24612 LOC_Os03g55930 LOC_Os05g05230 LOC_Os03g08640 LOC_Os03g22950 LOC_Os01g56620 LOC_Os03g59050 LOC_Os03g49710 LOC_Os01g05050 LOC_Os01g64190 LOC_Os01g72940 More.. |
| Downstream Genes | LOC_Os07g20150 LOC_Os12g10580 LOC_Os08g27090 LOC_Os12g34550 LOC_Os08g40610 LOC_Os07g10250 LOC_Os09g32274 LOC_Os12g16350 LOC_Os11g38670 LOC_Os12g07820 LOC_Os10g42430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05560.1 |
| Rice Genome Annotation | LOC_Os05g05560.1 |
| Ricechip | LOC_Os05g05560.1 |
| KEGG | osa:4337808 dosa:Os05t0148300-01 |
| Entrez-Gene | 4337808 |