RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05590.1 View Network Show in Genome Browser |
| Other Names | Os05g0148600 |
| Description | transporter, monovalent cation:proton antiporter-2 family, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2777359-2783546 Nucleotide Length: 1635 |
| Protein-coding | LOC_Os05g05590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47000 LOC_Os01g53810 |
| Reference | |
|---|---|
| PubMed | 20963607 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05590.1 |
| Rice Genome Annotation | LOC_Os05g05590.1 |
| Ricechip | LOC_Os05g05590.1 |
| KEGG | osa:4337811 dosa:Os05t0148600-01 |
| Entrez-Gene | 4337811 |