RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g05700.1 View Network Show in Genome Browser |
| Other Names | Os05g0149600 |
| Description | cullin, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 2834136-2840848 Nucleotide Length: 2235 |
| Protein-coding | LOC_Os05g05700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47870 LOC_Os01g01700 LOC_Os03g15880 LOC_Os02g07120 LOC_Os01g65920 LOC_Os01g63420 LOC_Os04g40830 LOC_Os03g27820 LOC_Os01g43540 LOC_Os04g56070 LOC_Os03g53230 More.. |
| Downstream Genes | LOC_Os11g26910 LOC_Os11g42160 LOC_Os09g36830 LOC_Os06g06050 LOC_Os05g37690 LOC_Os05g35110 LOC_Os05g30190 LOC_Os05g05800 LOC_Os06g12690 LOC_Os06g46770 LOC_Os05g42424 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g05700.1 |
| Rice Genome Annotation | LOC_Os05g05700.1 |
| Ricechip | LOC_Os05g05700.1 |
| KEGG | osa:4337820 dosa:Os05t0149600-02 |
| Entrez-Gene | 4337820 |