RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g05800.1 View Network Show in Genome Browser
Other Names	Os05g0150500
Description	OsFBL21 - F-box domain and LRR containing protein, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 2892496-2899113 Nucleotide Length: 1785
Protein-coding	LOC_Os05g05800

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0007154	cell communication	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009991	response to extracellular stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005622	intracellular	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os05g05700 LOC_Os03g43410 LOC_Os01g27150 LOC_Os03g14260 LOC_Os02g16540
Downstream Genes	LOC_Os12g40900 LOC_Os11g26910 LOC_Os07g37830

miRNA Regulations
miRNAs	osa-miR393b-5p osa-miR393a

Reference
PubMed	22846038 22253868

Database Links
Gramene	LOC_Os05g05800.1
Rice Genome Annotation	LOC_Os05g05800.1
Ricechip	LOC_Os05g05800.1
KEGG	osa:4337827 dosa:Os05t0150500-00
Entrez-Gene	4337827