RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06260.1 View Network Show in Genome Browser |
| Other Names | Os05g0154500 |
| Description | Spc97 / Spc98 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3181566-3188216 Nucleotide Length: 2265 |
| Protein-coding | LOC_Os05g06260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g54420 LOC_Os03g25130 LOC_Os03g32150 LOC_Os05g01994 LOC_Os01g70060 LOC_Os01g63800 LOC_Os05g03050 LOC_Os02g47970 |
| Downstream Genes | LOC_Os06g51400 LOC_Os11g03570 LOC_Os12g03340 LOC_Os05g06450 LOC_Os05g34820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06260.1 |
| Rice Genome Annotation | LOC_Os05g06260.1 |
| Ricechip | LOC_Os05g06260.1 |
| KEGG | osa:4337843 dosa:Os05t0154500-01 |
| Entrez-Gene | 4337843 |