RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g06280.1 View Network Show in Genome Browser
Other Names	Os05g0154800,Os05g0154700
Description	ATKINESIN-13A/KINESIN-13A, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 3203042-3212349 Nucleotide Length: 3300
Protein-coding	LOC_Os05g06280

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0003774	motor activity	Molecular Function	IEA
GO:0003774	motor activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005856	cytoskeleton	Cellular Component	IEA
GO:0005856	cytoskeleton	Cellular Component	IEA
GO:0005794	Golgi apparatus	Cellular Component	IEA
GO:0005794	Golgi apparatus	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g54080 LOC_Os01g32800 LOC_Os02g46320 LOC_Os03g05812 LOC_Os03g53720 LOC_Os03g36930 LOC_Os02g26370 LOC_Os04g42370 LOC_Os03g58240 LOC_Os01g68710 LOC_Os03g50320 More..
Downstream Genes	LOC_Os12g13590 LOC_Os05g50970 LOC_Os06g38550 LOC_Os05g24601 LOC_Os05g22940 LOC_Os08g29669 LOC_Os12g10560 LOC_Os08g06470 LOC_Os09g36770 LOC_Os11g07280 LOC_Os05g45930 More..

Reference
PubMed	20587735

Database Links
Gramene	LOC_Os05g06280.1
Rice Genome Annotation	LOC_Os05g06280.1
Ricechip	LOC_Os05g06280.1
KEGG	osa:4337846 osa:4337845 dosa:Os05t0154800-01 dosa:Os05t0154700-01
Entrez-Gene	4337846