RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06330.1 View Network Show in Genome Browser |
| Other Names | Os05g0155300 |
| Description | nifU, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3241299-3245201 Nucleotide Length: 819 |
| Protein-coding | LOC_Os05g06330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47340 LOC_Os01g54020 LOC_Os01g57460 LOC_Os02g27440 LOC_Os03g01750 LOC_Os01g70960 LOC_Os03g14370 LOC_Os01g58010 LOC_Os03g51990 LOC_Os01g40620 LOC_Os03g15050 More.. |
| Downstream Genes | LOC_Os05g49300 LOC_Os12g02120 LOC_Os11g02180 LOC_Os09g39420 LOC_Os12g30030 LOC_Os07g01930 LOC_Os09g16910 LOC_Os08g38720 LOC_Os08g05490 LOC_Os05g23620 LOC_Os10g42840 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06330.1 |
| Rice Genome Annotation | LOC_Os05g06330.1 |
| Ricechip | LOC_Os05g06330.1 |
| KEGG | osa:4337851 dosa:Os05t0155300-01 |
| Entrez-Gene | 4337851 |