RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
---|---|
Locus Name | LOC_Os05g06350.1 View Network Show in Genome Browser |
Other Names | Os05g0155601,Os05g0155500 |
Description | importin subunit alpha, putative, expressed |
Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3251080-3256042 Nucleotide Length: 1605 |
Protein-coding | LOC_Os05g06350 |
Gene Ontology Classification | ||||
---|---|---|---|---|
GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006810 | transport | Biological Process | IEA | |
GO:0006810 | transport | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0005215 | transporter activity | Molecular Function | IEA | |
GO:0005215 | transporter activity | Molecular Function | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005635 | nuclear envelope | Cellular Component | IEA | |
GO:0005635 | nuclear envelope | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
---|---|
Upstream Genes | LOC_Os03g18350 LOC_Os03g06190 LOC_Os03g03710 LOC_Os02g39890 LOC_Os03g22570 LOC_Os01g25370 LOC_Os04g43922 LOC_Os04g59494 LOC_Os02g57070 LOC_Os04g01130 LOC_Os02g34570 More.. |
Downstream Genes | LOC_Os05g28510 LOC_Os12g38110 LOC_Os07g38760 LOC_Os09g07820 LOC_Os06g23430 LOC_Os12g06890 LOC_Os05g49890 LOC_Os07g23169 LOC_Os10g30100 LOC_Os08g19850 LOC_Os08g37444 More.. |
Reference | |
---|---|
PubMed | 11124253 |
Database Links | |
---|---|
Gramene | LOC_Os05g06350.1 |
Rice Genome Annotation | LOC_Os05g06350.1 |
Ricechip | LOC_Os05g06350.1 |
KEGG | osa:4337853 dosa:Os05t0155601-00dosa:Os05t0155500-01 |