RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06470.1 View Network Show in Genome Browser |
| Other Names | Os05g0156800 |
| Description | suppressor of Mek, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3323282-3334849 Nucleotide Length: 1620 |
| Protein-coding | LOC_Os05g06470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53230 LOC_Os03g18180 LOC_Os03g51200 LOC_Os03g57450 LOC_Os04g27060 LOC_Os04g26910 LOC_Os04g26870 LOC_Os01g43090 LOC_Os04g26920 LOC_Os04g26890 LOC_Os04g54940 More.. |
| Downstream Genes | LOC_Os12g34510 LOC_Os08g33100 LOC_Os07g36140 LOC_Os05g09620 LOC_Os05g28190 LOC_Os05g29870 LOC_Os06g10620 LOC_Os05g28290 LOC_Os12g25120 LOC_Os07g36130 LOC_Os06g09170 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR810a |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06470.1 |
| Rice Genome Annotation | LOC_Os05g06470.1 |
| Ricechip | LOC_Os05g06470.1 |
| KEGG | osa:4337863 dosa:Os05t0156800-01 |
| Entrez-Gene | 4337863 |