RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06500.1 View Network Show in Genome Browser |
| Other Names | Os05g0157200 |
| Description | universal stress protein domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3345098-3347273 Nucleotide Length: 504 |
| Protein-coding | LOC_Os05g06500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g65440 LOC_Os03g62340 LOC_Os02g54590 LOC_Os02g12660 LOC_Os04g44830 LOC_Os02g06640 LOC_Os02g37060 LOC_Os03g45280 LOC_Os03g60400 LOC_Os01g61814 LOC_Os03g21940 More.. |
| Downstream Genes | LOC_Os12g31710 LOC_Os08g15060 LOC_Os06g37620 LOC_Os06g01850 LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 LOC_Os06g49490 LOC_Os07g12200 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06500.1 |
| Rice Genome Annotation | LOC_Os05g06500.1 |
| Ricechip | LOC_Os05g06500.1 |
| KEGG | osa:4337867 dosa:Os05t0157200-01 |
| Entrez-Gene | 4337867 |