RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06670.1 View Network Show in Genome Browser |
| Other Names | Os05g0158600 |
| Description | gibberellin 2-oxidase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3459616-3465991 Nucleotide Length: 1149 |
| Protein-coding | LOC_Os05g06670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41954 |
| Downstream Genes | LOC_Os06g07914 LOC_Os09g37080 LOC_Os09g07450 LOC_Os09g15790 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00904 |
| Metacyc Pathways | PWY-102 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06670.1 |
| Rice Genome Annotation | LOC_Os05g06670.1 |
| Ricechip | LOC_Os05g06670.1 |
| KEGG | osa:4337874 dosa:Os05t0158600-01 |
| Entrez-Gene | 4337874 |