RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06690.1 View Network Show in Genome Browser |
| Other Names | Os05g0159000 |
| Description | HECT-domain domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3472305-3485106 Nucleotide Length: 3093 |
| Protein-coding | LOC_Os05g06690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05340 LOC_Os01g19760 LOC_Os03g45290 LOC_Os04g42840 LOC_Os02g57120 |
| Downstream Genes | LOC_Os06g48640 LOC_Os09g15750 LOC_Os12g22630 LOC_Os05g19270 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06690.1 |
| Rice Genome Annotation | LOC_Os05g06690.1 |
| Ricechip | LOC_Os05g06690.1 |
| KEGG | osa:4337876 dosa:Os05t0159000-01 |
| Entrez-Gene | 4337876 |