RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06700.1 View Network Show in Genome Browser |
| Other Names | Os05g0159100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3489166-3492295 Nucleotide Length: 576 |
| Protein-coding | LOC_Os05g06700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51590 LOC_Os04g50990 LOC_Os02g47140 LOC_Os04g42520 LOC_Os02g40010 LOC_Os02g07260 LOC_Os03g22950 LOC_Os01g69230 |
| Downstream Genes | LOC_Os05g41480 LOC_Os05g48240 LOC_Os07g10830 LOC_Os05g38610 LOC_Os10g41450 LOC_Os07g07020 LOC_Os06g14740 LOC_Os07g12150 LOC_Os06g45710 LOC_Os06g48310 LOC_Os07g30150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06700.1 |
| Rice Genome Annotation | LOC_Os05g06700.1 |
| Ricechip | LOC_Os05g06700.1 |
| KEGG | osa:4337877 dosa:Os05t0159100-01 |
| Entrez-Gene | 4337877 |