RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06970.1 View Network Show in Genome Browser |
| Other Names | Os05g0162000 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3645870-3648069 Nucleotide Length: 1080 |
| Protein-coding | LOC_Os05g06970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05470 LOC_Os04g46620 LOC_Os02g22780 LOC_Os02g14929 LOC_Os03g42220 LOC_Os03g59020 LOC_Os01g46120 LOC_Os04g59150 |
| Downstream Genes | LOC_Os06g44180 LOC_Os06g47320 LOC_Os06g36700 LOC_Os06g34690 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06970.1 |
| Rice Genome Annotation | LOC_Os05g06970.1 |
| Ricechip | LOC_Os05g06970.1 |
| KEGG | osa:4337892 dosa:Os05t0162000-01 |
| Entrez-Gene | 4337892 |