RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g06980.1 View Network Show in Genome Browser |
| Other Names | Os05g0162200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3652662-3663546 Nucleotide Length: 1971 |
| Protein-coding | LOC_Os05g06980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g43050 LOC_Os01g72800 LOC_Os03g02970 |
| Downstream Genes | LOC_Os08g08030 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5833 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g06980.1 |
| Rice Genome Annotation | LOC_Os05g06980.1 |
| Ricechip | LOC_Os05g06980.1 |
| KEGG | osa:9272304 dosa:Os05t0162200-02 |
| Entrez-Gene | 9272304 |