RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07060.1 View Network Show in Genome Browser |
| Other Names | Os05g0163300 |
| Description | fasciclin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3715762-3716891 Nucleotide Length: 828 |
| Protein-coding | LOC_Os05g07060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62490 LOC_Os03g16610 LOC_Os01g06580 LOC_Os03g28330 LOC_Os05g02820 LOC_Os03g63390 LOC_Os01g71474 LOC_Os01g39830 |
| Downstream Genes | LOC_Os07g48060 LOC_Os05g48270 LOC_Os07g40940 LOC_Os08g24790 LOC_Os11g36340 LOC_Os07g01370 LOC_Os09g25850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07060.1 |
| Rice Genome Annotation | LOC_Os05g07060.1 |
| Ricechip | LOC_Os05g07060.1 |
| KEGG | osa:4337901 dosa:Os05t0163300-01 |
| Entrez-Gene | 4337901 |