RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07070.1 View Network Show in Genome Browser |
| Other Names | Os05g0163400 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3718325-3725419 Nucleotide Length: 1683 |
| Protein-coding | LOC_Os05g07070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27140 |
| Downstream Genes | LOC_Os12g35330 LOC_Os06g41010 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 osa-miR172b |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07070.1 |
| Rice Genome Annotation | LOC_Os05g07070.1 |
| Ricechip | LOC_Os05g07070.1 |
| KEGG | osa:4337902 dosa:Os05t0163400-01 |
| Entrez-Gene | 4337902 |