RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07090.3 View Network Show in Genome Browser |
| Other Names | Os05g0163700 |
| Description | acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3730312-3735239 Nucleotide Length: 888 |
| Protein-coding | LOC_Os05g07090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g32330 LOC_Os01g22520 LOC_Os02g31040 LOC_Os05g06750 LOC_Os04g32020 LOC_Os03g17700 LOC_Os03g38980 LOC_Os02g43710 LOC_Os03g49580 |
| Downstream Genes | LOC_Os07g49520 LOC_Os06g01390 LOC_Os06g06090 LOC_Os11g43620 LOC_Os10g38950 LOC_Os11g39650 LOC_Os08g06060 LOC_Os08g42000 LOC_Os10g28640 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR529b |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07090.3 |
| Rice Genome Annotation | LOC_Os05g07090.3 |
| Ricechip | LOC_Os05g07090.3 |
| KEGG | osa:4337904 dosa:Os05t0163700-01 |
| Entrez-Gene | 4337904 |