RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07220.1 View Network Show in Genome Browser |
| Other Names | Os05g0164900 |
| Description | kelch repeat-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 3813306-3819769 Nucleotide Length: 3186 |
| Protein-coding | LOC_Os05g07220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40740 LOC_Os01g19480 LOC_Os05g07000 LOC_Os03g49580 LOC_Os01g71270 LOC_Os04g52540 LOC_Os04g56710 LOC_Os01g07140 LOC_Os03g50940 LOC_Os02g56100 |
| Downstream Genes | LOC_Os07g39870 LOC_Os05g31020 LOC_Os06g07210 LOC_Os10g06130 LOC_Os11g14430 LOC_Os08g36490 LOC_Os07g35610 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5531 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07220.1 |
| Rice Genome Annotation | LOC_Os05g07220.1 |
| Ricechip | LOC_Os05g07220.1 |
| KEGG | osa:4337909 dosa:Os05t0164900-01 |
| Entrez-Gene | 4337909 |