RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07650.1 View Network Show in Genome Browser |
| Other Names | Os05g0168500 |
| Description | transmembrane 9 superfamily member, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4107109-4109880 Nucleotide Length: 1971 |
| Protein-coding | LOC_Os05g07650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62020 LOC_Os04g55670 LOC_Os04g01300 LOC_Os02g41780 LOC_Os05g03174 |
| Downstream Genes | LOC_Os06g44620 LOC_Os06g49320 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07650.1 |
| Rice Genome Annotation | LOC_Os05g07650.1 |
| Ricechip | LOC_Os05g07650.1 |
| KEGG | osa:4337924 dosa:Os05t0168500-01 |
| Entrez-Gene | 4337924 |