RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07670.1 View Network Show in Genome Browser |
| Other Names | Os05g0168700 |
| Description | solute carrier family 35 member E3, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4117728-4121359 Nucleotide Length: 1065 |
| Protein-coding | LOC_Os05g07670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15900 LOC_Os05g06430 LOC_Os01g08450 LOC_Os02g03470 LOC_Os01g74640 |
| Downstream Genes | LOC_Os12g19290 LOC_Os09g01690 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00400 rn01100 rn01110 |
| Metacyc Pathways | ARO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07670.1 |
| Rice Genome Annotation | LOC_Os05g07670.1 |
| Ricechip | LOC_Os05g07670.1 |
| KEGG | osa:4337925 dosa:Os05t0168700-01 |
| Entrez-Gene | 4337925 |