RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07700.3 View Network Show in Genome Browser |
| Other Names | Os05g0169100 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4142122-4144053 Nucleotide Length: 618 |
| Protein-coding | LOC_Os05g07700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62350 LOC_Os01g64090 LOC_Os04g28180 LOC_Os02g21660 LOC_Os03g18570 LOC_Os03g18580 LOC_Os05g06770 LOC_Os02g28810 LOC_Os03g40180 LOC_Os03g10340 LOC_Os04g50990 More.. |
| Downstream Genes | LOC_Os05g38520 LOC_Os05g27940 LOC_Os11g29190 LOC_Os08g44450 LOC_Os05g19370 LOC_Os07g10720 LOC_Os09g32976 LOC_Os08g23710 LOC_Os08g44380 LOC_Os05g30530 LOC_Os09g31180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07700.3 |
| Rice Genome Annotation | LOC_Os05g07700.3 |
| Ricechip | LOC_Os05g07700.3 |
| KEGG | osa:4337928 dosa:Os05t0169100-01 |
| Entrez-Gene | 4337928 |