RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g07720.1 View Network Show in Genome Browser
Other Names	Os05g0169300
Description	alliin lyase precursor, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 4152905-4155895 Nucleotide Length: 1326
Protein-coding	LOC_Os05g07720

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009606	tropism	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005623	cell	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g34560 LOC_Os02g34850 LOC_Os04g52710

Pathways
KEGG Pathways	rn00340 rn01100 rn01110
Metacyc Pathways	HISTSYN-PWY

Reference
PubMed	22582989

Database Links
Gramene	LOC_Os05g07720.1
Rice Genome Annotation	LOC_Os05g07720.1
Ricechip	LOC_Os05g07720.1
KEGG	osa:4337930 dosa:Os05t0169300-01
Entrez-Gene	4337930