RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07730.1 View Network Show in Genome Browser |
| Other Names | Os05g0169400 |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4161052-4164781 Nucleotide Length: 1725 |
| Protein-coding | LOC_Os05g07730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g57450 LOC_Os03g17700 LOC_Os03g57510 LOC_Os01g08020 LOC_Os04g49510 LOC_Os02g46090 LOC_Os02g58520 LOC_Os01g07520 LOC_Os04g53240 LOC_Os03g20370 LOC_Os01g16240 More.. |
| Downstream Genes | LOC_Os07g06740 LOC_Os09g13610 LOC_Os06g06090 LOC_Os06g04450 LOC_Os10g42950 LOC_Os08g24400 LOC_Os09g35920 LOC_Os12g30150 LOC_Os05g08430 LOC_Os09g10960 LOC_Os11g07040 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4041 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07730.1 |
| Rice Genome Annotation | LOC_Os05g07730.1 |
| Ricechip | LOC_Os05g07730.1 |
| KEGG | osa:4337931 dosa:Os05t0169400-01 |
| Entrez-Gene | 4337931 |