RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g07870.1 View Network Show in Genome Browser |
| Other Names | Os05g0170950 |
| Description | triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 4249996-4255036 Nucleotide Length: 1245 |
| Protein-coding | LOC_Os05g07870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54580 LOC_Os02g12740 LOC_Os03g57760 LOC_Os03g42320 LOC_Os01g35050 LOC_Os04g10750 LOC_Os02g40030 LOC_Os05g02490 LOC_Os04g10690 LOC_Os01g13350 LOC_Os03g61200 More.. |
| Downstream Genes | LOC_Os05g32720 LOC_Os06g09850 LOC_Os06g05980 LOC_Os05g51630 LOC_Os09g20090 LOC_Os06g37080 LOC_Os06g08860 LOC_Os07g38610 LOC_Os05g23440 LOC_Os10g42820 LOC_Os08g42720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g07870.1 |
| Rice Genome Annotation | LOC_Os05g07870.1 |
| Ricechip | LOC_Os05g07870.1 |
| KEGG | dosa:Os05t0170950-00 |